Fitness data for HSERO_RS13810 in Herbaspirillum seropedicae SmR1

polysaccharide deacetylase
SEED: Glycosyl transferase, family 2:Polysaccharide deacetylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source L-Proline (N) -1.0 -2.7 compare
stress Cobalt chloride 0.2 mM -0.9 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.1 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.8 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.5 compare
carbon source D-Glucose (C) -0.8 -2.3 compare
carbon source D-Mannose (C) -0.7 -1.5 compare
carbon source L-Proline (C) -0.7 -1.4 compare
carbon source D-Glucose (C) -0.7 -0.8 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.8 compare
plant Control soil assay; outgrowth in LB -0.6 -1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.0 compare
carbon source L-Rhamnose (C) +0.7 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.8 compare
control NoPredeControl +1.1 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.0 +2.0 compare