Fitness data for HSERO_RS13745 in Herbaspirillum seropedicae SmR1

chain-length determining protein
SEED: Lipopolysaccharide biosynthesis chain length determinant protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Xylose (C) -0.6 -1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -2.1 compare
stress Lomefloxacin 0.012 mM -0.5 -0.9 compare
carbon source pyruvate (C) -0.5 -2.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.6 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.5 +2.1 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.5 +1.8 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +1.3 compare
stress Dimethyl Sulfoxide 5 vol% +0.5 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +1.8 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +2.3 compare
stress nitrite 20 mM +0.5 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.5 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.6 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.8 +4.0 compare