Fitness data for HSERO_RS13690 in Herbaspirillum seropedicae SmR1

diaminopimelate decarboxylase
SEED: Diaminopimelate decarboxylase (EC 4.1.1.20)
KEGG: diaminopimelate decarboxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.3 compare
carbon source L-Rhamnose (C) -0.4 -1.5 compare
carbon source L-Proline (C) -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.2 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +0.9 compare
carbon source D,L-Malic Acid (C) +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +2.0 compare
carbon source D-Galactose (C) +0.3 +1.8 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.3 +2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +0.9 compare
carbon source Carbon source Phenylacetic 5 mM +0.4 +2.0 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.5 compare
carbon source D,L-Lactate (C) +0.4 +2.1 compare
carbon source Xylitol (C) +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.9 compare