Fitness data for HSERO_RS13685 in Herbaspirillum seropedicae SmR1

peptidase S1
SEED: Serine protease precursor MucD/AlgY associated with sigma factor RpoE
KEGG:

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -1.2 -1.6 compare
stress Sisomicin 0.125 mg/ml -0.7 -1.5 compare
stress Nickel (II) chloride 0.6 mM -0.7 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.6 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.2 compare
carbon source Xylitol (C) -0.5 -1.6 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -1.3 compare
stress nitrite 20 mM -0.5 -2.0 compare
carbon source succinate (C) +0.5 +2.3 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.5 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.9 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.6 +1.6 compare
carbon source D-Lactate (C) +0.6 +2.0 compare
carbon source D-Glucose (C) +0.6 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.7 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +1.6 compare