Fitness data for HSERO_RS13640 in Herbaspirillum seropedicae SmR1

hypothetical protein
SEED: Alkylphosphonate utilization operon protein PhnA
KEGG: phosphonoacetate hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.4 -1.7 compare
carbon source D,L-Lactate (C) -1.1 -2.0 compare
stress Sisomicin 0.125 mg/ml -0.9 -1.5 compare
stress Fusidic 0.025 mg/ml -0.9 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8 -1.2 compare
carbon source D-Glucose-6-Phosphate (C) -0.7 -1.8 compare
carbon source D-Glucose-6-Phosphate (C) -0.7 -1.8 compare
carbon source D-Gluconic Acid (C) -0.6 -1.6 compare
carbon source Glycerol (C) -0.6 -1.7 compare
stress Thallium(I) acetate 0.001 mg/ml -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.6 -1.4 compare
carbon source L-Arabinose (C) -0.6 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.0 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.6 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.4 compare
carbon source Carbon source D-Glucose 20 mM +0.8 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.2 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.6 +1.6 compare