Fitness data for HSERO_RS13635 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: Sodium/bile acid symporter family
KEGG: solute carrier family 10 (sodium/bile acid cotransporter), member 7

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Thallium(I) acetate 0.001 mg/ml -0.5 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.8 compare
stress Lomefloxacin 0.012 mM -0.4 -1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.8 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.4 -1.4 compare
control NoPredeControl -0.4 -1.7 compare
carbon source L-Asparagine (C) -0.4 -1.0 compare
stress Nickel (II) chloride 0.6 mM -0.3 -1.3 compare
carbon source Glycerol (C) +0.4 +1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +1.2 compare
carbon source D-Glucose-6-Phosphate (C) +0.4 +1.7 compare
carbon source D-Xylose (C) +0.4 +1.3 compare
carbon source a-Ketoglutaric (C) +0.4 +2.4 compare
carbon source D-Glucose-6-Phosphate (C) +0.4 +2.1 compare
carbon source pyruvate (C) +0.4 +1.5 compare
carbon source L-Asparagine (C) +0.5 +1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5 +1.6 compare
carbon source D,L-Lactate (C) +0.7 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.3 compare