Fitness data for HSERO_RS13620 in Herbaspirillum seropedicae SmR1

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
control NoPredeControl -0.7 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -2.6 compare
stress Lomefloxacin 0.012 mM -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.9 compare
vitamin No vitamins t2 +0.4 +2.4 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.5 +2.6 compare
vitamin With vitamins t2 +0.5 +2.4 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.5 +2.2 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.5 +3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +3.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +3.5 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.6 +4.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +2.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.7 +3.9 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.7 +4.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +3.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +3.7 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +2.3 +14.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +2.6 +14.2 compare