Fitness data for HSERO_RS13580 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: LysR family regulatory protein CidR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -3.1 compare
carbon source D,L-Lactate (C) -0.8 -2.9 compare
nitrogen source nitrate (N); low aeration -0.7 -3.5 compare
carbon source D-Mannose (C) -0.7 -1.5 compare
carbon source Xylitol (C) -0.7 -1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.7 -3.0 compare
carbon source D-Xylose (C) -0.6 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.3 compare
carbon source D-Ribose (C) -0.6 -1.3 compare
carbon source L-Rhamnose (C) -0.6 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.6 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.6 +2.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.6 +1.3 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.6 +1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +0.7 compare