Fitness data for HSERO_RS13480 in Herbaspirillum seropedicae SmR1

C4-dicarboxylate ABC transporter
SEED: TRAP transporter solute receptor, unknown substrate 4

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.8 -2.2 compare
stress Fusidic 0.025 mg/ml +0.6 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.4 compare
stress Sisomicin 0.125 mg/ml +0.7 +1.9 compare
carbon source D-Glucose-6-Phosphate (C) +0.7 +2.3 compare
carbon source D-Sorbitol (C) +0.7 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.6 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days +0.7 +3.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +3.2 compare
carbon source L-Lactate (C) +0.8 +1.6 compare
carbon source L-Rhamnose (C) +0.8 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.7 compare
nitrogen source L-Proline (N) +0.9 +1.4 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.9 +4.5 compare
carbon source L-Fucose (C) +0.9 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9 +1.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +2.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.4 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +2.3 +2.4 compare