Fitness data for HSERO_RS13265 in Herbaspirillum seropedicae SmR1

G3E family GTPase
SEED: CobW GTPase involved in cobalt insertion for B12 biosynthesis
KEGG: cobalamin biosynthesis protein CobW

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
supernatant control Vogels_fungal_media; pH 5.5 -5.3 -3.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -4.8 -4.7 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -4.7 -4.5 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -4.5 -4.3 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -3.5 -3.7 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -3.5 -4.4 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -3.0 -4.5 compare
carbon source Carbon source Phenylacetic 5 mM -3.0 -4.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -2.5 -3.8 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -2.5 -3.3 compare
vitamin With vitamins t2 -2.5 -4.1 compare
nitrogen source nitrate (N); low aeration -2.3 -5.3 compare
supernatant control Vogels_fungal_media; pH 5.5 -2.2 -2.9 compare
supernatant control Vogels_fungal_media 0.1X -2.2 -3.8 compare
carbon source Carbon source Phenylacetic 5 mM -2.2 -4.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.1 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -2.1 -3.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -2.1 -3.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.9 -2.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -1.9 -3.1 compare