Fitness data for HSERO_RS13175 in Herbaspirillum seropedicae SmR1

urea ABC transporter ATP-binding protein
SEED: Urea ABC transporter, ATPase protein UrtD
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -2.9 compare
stress Cobalt chloride 0.2 mM -0.6 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.6 -1.2 compare
carbon source L-Arabinose (C) -0.6 -1.8 compare
carbon source D-Xylose (C) -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.0 compare
carbon source L-Rhamnose (C) -0.5 -2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.6 compare
carbon source Xylitol (C) -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.3 compare
carbon source L-Malic (C) +0.4 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
vitamin With vitamins t2 +0.4 +1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.4 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.4 +1.9 compare
carbon source D,L-Lactate (C) +0.5 +1.9 compare
stress Sisomicin 0.125 mg/ml +0.5 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +1.5 compare