Fitness data for HSERO_RS13140 in Herbaspirillum seropedicae SmR1

poly(3-hydroxyalkanoate) synthetase
SEED: Poly(3-hydroxyalkanoate) synthetase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.8 -4.6 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.7 -3.5 compare
carbon source D-Galactose (C) -0.5 -1.8 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.5 -2.6 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.3 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.3 +1.8 compare
carbon source L-Malic (C) +0.3 +1.8 compare
stress Dimethyl Sulfoxide 5 vol% +0.3 +1.7 compare
carbon source D-Galacturonic Acid (C) +0.3 +2.3 compare
carbon source D-Ribose (C) +0.4 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +1.3 compare
carbon source L-Glutamine (C) +0.4 +2.2 compare
stress Nickel (II) chloride 0.6 mM +0.5 +2.4 compare
carbon source D-Ribose (C) +0.5 +1.8 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +2.3 compare