Fitness data for HSERO_RS13010 in Herbaspirillum seropedicae SmR1

TonB-denpendent receptor
SEED: Ferrichrome-iron receptor
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.5 -3.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.3 -1.8 compare
carbon source D-Galactose (C) -0.3 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.8 compare
carbon source pyruvate (C) +0.3 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.3 compare
supernatant control Vogels_fungal_media 0.1X +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +0.9 compare
carbon source Xylitol (C) +0.3 +1.8 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.3 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3 +1.7 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.3 compare
carbon source L-Lactate (C) +0.3 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.4 compare