Fitness data for HSERO_RS13005 in Herbaspirillum seropedicae SmR1

histidine kinase
SEED: Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-)
KEGG: two-component system, sensor histidine kinase RegB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 -3.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.1 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.4 compare
carbon source L-Proline (C) -0.9 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -3.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.7 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -3.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.7 +2.6 compare
carbon source D-Sorbitol (C) +0.7 +2.2 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.7 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +2.7 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.9 +2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.9 +2.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.9 +4.4 compare