Fitness data for HSERO_RS12870 in Herbaspirillum seropedicae SmR1

PilP assembly chaperone transmembrane protein
SEED: Sigma-fimbriae chaperone protein
KEGG: fimbrial chaperone protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Xylitol (C) -0.5 -1.3 compare
stress A22 0.02 mg/ml -0.4 -2.2 compare
stress Nickel (II) chloride 0.6 mM -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +3.0 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.4 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.5 compare
vitamin No vitamins t1 +0.4 +1.1 compare
vitamin With vitamins t2 +0.4 +1.1 compare
carbon source D-Ribose (C) +0.4 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.2 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.1 +1.9 compare