Fitness data for HSERO_RS12860 in Herbaspirillum seropedicae SmR1

histidine kinase
SEED: Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.7 -4.3 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.7 -3.8 compare
nitrogen source nitrate (N); low aeration -0.5 -2.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.5 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.6 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.5 +4.0 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.5 +1.8 compare
carbon source D-Mannose (C) +0.6 +3.3 compare
control NoPredeControl +0.6 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.1 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.7 +3.4 compare
stress sodium fluoride 100 mM +0.7 +2.5 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.8 +5.9 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.9 +5.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +1.0 +7.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +1.4 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +1.2 +8.0 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +2.1 +14.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +2.2 +15.4 compare