Fitness data for HSERO_RS12840 in Herbaspirillum seropedicae SmR1

Crp/Fnr family transcriptional regulator
SEED: transcriptional regulator, Crp/Fnr family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -1.2 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -1.6 compare
carbon source succinate (C) +0.6 +2.5 compare
carbon source L-Asparagine (C) +0.7 +2.6 compare
carbon source L-Lactate (C) +0.7 +2.3 compare
carbon source D-Gluconic Acid (C) +0.7 +2.5 compare
carbon source D-Xylose (C) +0.7 +1.6 compare
carbon source D-Galactose (C) +0.8 +2.9 compare
carbon source L-Rhamnose (C) +0.8 +1.8 compare
carbon source D-Galacturonic Acid (C) +0.8 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +1.5 compare
carbon source L-Glutamine (C) +0.8 +3.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +3.0 compare
carbon source L-Rhamnose (C) +0.9 +2.1 compare
carbon source D-Galactose (C) +1.0 +2.5 compare
carbon source D-Glucose (C) +1.0 +3.6 compare
carbon source L-Arabinose (C) +1.0 +2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.3 +1.5 compare