Fitness data for HSERO_RS12830 in Herbaspirillum seropedicae SmR1

branched-chain amino acid ABC transporter ATP-binding protein
SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -2.5 compare
carbon source D-Gluconic Acid (C) -0.7 -2.5 compare
carbon source L-Fucose (C) -0.5 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.0 compare
carbon source Xylitol (C) -0.4 -1.4 compare
carbon source D-Galactose (C) -0.4 -1.4 compare
carbon source D-Gluconic Acid (C) -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.6 compare
stress A22 0.04 mg/ml +0.4 +1.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.4 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.4 +1.8 compare
carbon source L-Malic (C) +0.4 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.4 compare
carbon source Glycerol (C) +0.4 +2.3 compare
nutrient L-Serine +0.4 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.1 compare
stress nitrate 200 mM +0.6 +1.6 compare
stress nitrite 20 mM +0.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.2 compare