Fitness data for HSERO_RS12820 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -0.8 -1.7 compare
stress Nickel (II) chloride 0.6 mM -0.8 -2.2 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.8 -3.5 compare
stress Cisplatin 0.003 mg/ml -0.7 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.2 compare
carbon source Glycerol (C) -0.6 -1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.2 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +0.6 +1.7 compare
carbon source Xylitol (C) +0.6 +1.3 compare
carbon source L-Fucose (C) +0.7 +2.4 compare
stress Chloride stress +0.7 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.5 compare
carbon source D-Xylose (C) +0.7 +2.3 compare
stress Chloride stress +0.7 +2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.0 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.1 +2.0 compare