Fitness data for HSERO_RS12775 in Herbaspirillum seropedicae SmR1

ABC transporter substrate-binding protein
SEED: FIG00461291: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL -1.4 -3.3 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.2 -2.1 compare
plant Control soil assay; outgrowth in LB -1.1 -2.2 compare
carbon source D-Xylose (C) -1.1 -2.0 compare
carbon source L-Arabinose (C) -1.0 -1.3 compare
stress nitrite 20 mM -1.0 -2.4 compare
carbon source pyruvate (C) -0.9 -2.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.9 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.0 compare
carbon source m-Inositol (C) -0.7 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.5 compare
vitamin No vitamins t2 +0.7 +1.6 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days +0.7 +3.8 compare
stress Cisplatin 0.003 mg/ml +0.8 +2.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.9 +3.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.9 +2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.0 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +1.3 compare
control NoPredeControl +1.3 +4.2 compare