Fitness data for HSERO_RS12760 in Herbaspirillum seropedicae SmR1

phenazine biosynthesis epimerase
SEED: Phenazine biosynthesis protein PhzF

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.3 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.0 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.4 compare
carbon source D-Ribose (C) -0.9 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.5 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.8 -2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -1.3 compare
carbon source D-Galactose (C) -0.6 -0.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.2 compare
carbon source L-mannose (C) -0.6 -1.9 compare
carbon source D-Galacturonic Acid (C) -0.6 -1.4 compare
nitrogen source L-Proline (N) -0.6 -2.0 compare
carbon source L-Lactate (C) -0.6 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.6 -1.2 compare
nutrient casaminos -0.6 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.5 +1.5 compare
carbon source L-Malic (C) +0.7 +2.8 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.7 +2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +0.8 compare
stress Lomefloxacin 0.012 mM +0.9 +2.5 compare