Fitness data for HSERO_RS12755 in Herbaspirillum seropedicae SmR1

MFS transporter
SEED: Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.6 -1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.5 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -2.9 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.8 compare
carbon source D-Galacturonic Acid (C) +0.5 +2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.5 +2.4 compare
stress sodium fluoride 100 mM +0.5 +1.8 compare
carbon source L-Fucose (C) +0.5 +1.8 compare
carbon source L-Fucose (C) +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.2 compare
carbon source Xylitol (C) +0.6 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.2 compare
carbon source D-Glucose (C) +0.7 +2.4 compare