Fitness data for HSERO_RS12735 in Herbaspirillum seropedicae SmR1

GNAT family acetyltransferase
SEED: Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
micoeukaryotes Acanthamoeba sp., muxed culture-1 -1.4 -1.5 compare
carbon source D-Glucose (C) -1.2 -1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.2 -1.2 compare
carbon source L-Rhamnose (C) -1.1 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -1.5 compare
stress Chloride stress -1.1 -1.7 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -1.1 -2.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -1.1 compare
carbon source L-Malic (C) +1.0 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.5 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.0 +1.7 compare
carbon source a-Ketoglutaric (C) +1.1 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +0.9 compare
carbon source pyruvate (C) +1.2 +2.3 compare
supernatant control Vogels_fungal_media 0.1X +1.2 +2.3 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +1.2 +0.9 compare
carbon source L-Proline (C) +1.3 +1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +1.3 +1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +1.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.9 +1.5 compare