Fitness data for HSERO_RS12685 in Herbaspirillum seropedicae SmR1

isochorismatase hydrolase
SEED: Isochorismatase (EC 3.3.2.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Galactose (C) -1.1 -2.7 compare
carbon source L-Asparagine (C) -0.8 -1.3 compare
stress Dimethyl Sulfoxide 5 vol% -0.8 -2.3 compare
carbon source L-Lactate (C) -0.7 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.7 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.9 +2.7 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.9 +1.1 compare
vitamin With vitamins t1 +1.0 +2.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.1 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.2 +1.0 compare
vitamin No vitamins t2 +1.2 +2.8 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.2 +1.8 compare
vitamin No vitamins t1 +1.2 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.3 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.6 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.7 +1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.3 +1.6 compare