Fitness data for HSERO_RS12475 in Herbaspirillum seropedicae SmR1

histidine kinase
SEED: Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source D-Galactose (C) -1.7 -1.7 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.3 -1.8 compare
stress Nickel (II) chloride 0.6 mM -1.0 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.9 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.9 -1.3 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.9 -1.8 compare
stress Lomefloxacin 0.012 mM -0.8 -0.7 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.8 -1.4 compare
stress A22 0.02 mg/ml -0.8 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.1 compare
plant Control soil assay; outgrowth in LB +0.8 +1.5 compare
carbon source D-Xylose (C) +0.8 +1.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.8 +1.2 compare
r2a control R2A control +0.9 +2.8 compare
plant Control soil assay; outgrowth in LB +1.0 +1.8 compare
carbon source L-Malic (C) +1.0 +2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.2 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.0 +5.7 compare