Fitness data for HSERO_RS12440 in Herbaspirillum seropedicae SmR1

universal stress protein
SEED: Universal stress protein UspA and related nucleotide-binding proteins

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.9 -2.2 compare
carbon source D-Glucose (C) -0.7 -2.0 compare
carbon source L-Rhamnose (C) -0.7 -2.8 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days -0.7 -2.7 compare
carbon source D-Ribose (C) -0.7 -2.5 compare
carbon source D,L-Lactate (C) -0.7 -3.2 compare
carbon source D,L-Lactate (C) -0.7 -2.3 compare
nitrogen source Ammonium chloride (N); low aeration -0.7 -2.4 compare
plant Control soil assay; outgrowth in LB -0.6 -1.4 compare
nitrogen source L-Glutamic (N); high aeration -0.6 -2.4 compare
carbon source L-Arabinose (C) -0.6 -1.5 compare
carbon source D-Glucose (C) -0.6 -1.5 compare
carbon source pyruvate (C) -0.6 -1.8 compare
carbon source L-Fucose (C) -0.6 -2.7 compare
carbon source D-Xylose (C) +0.6 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +1.0 compare
carbon source L-Proline (C) +0.7 +1.7 compare
carbon source L-Glutamine (C) +0.8 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.7 +1.5 compare