Fitness data for HSERO_RS12420 in Herbaspirillum seropedicae SmR1

transcriptional regulator
SEED: DNA-binding heavy metal response regulator
KEGG: two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Glucose (C) -1.3 -1.8 compare
control NoPredeControl -1.3 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.1 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.0 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.8 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.9 -2.9 compare
carbon source Xylitol (C) -0.9 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.8 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -1.4 compare
control NoPredeControl -0.7 -1.8 compare
stress Lomefloxacin 0.012 mM +0.7 +1.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.8 +1.9 compare
carbon source L-Fucose (C) +0.9 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +1.1 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.2 +1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.6 +2.1 compare