Fitness data for HSERO_RS12280 in Herbaspirillum seropedicae SmR1

ABC transporter permease
SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.7 -2.5 compare
stress Lomefloxacin 0.012 mM -0.6 -0.6 compare
stress Sisomicin 0.125 mg/ml -0.6 -1.0 compare
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 8 days -0.5 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.1 compare
control NoPredeControl -0.5 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.4 compare
control NoPredeControl +0.5 +2.1 compare
nitrogen source L-Proline (N) +0.5 +1.9 compare
carbon source D-Galacturonic Acid (C) +0.5 +2.1 compare
carbon source D-Galactose (C) +0.5 +1.7 compare
stress nitrate 200 mM +0.6 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.4 compare
stress Thallium(I) acetate 0.001 mg/ml +0.7 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +3.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4 +2.7 compare