Fitness data for HSERO_RS12275 in Herbaspirillum seropedicae SmR1

ABC transporter
SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 244 experiments or choose conditions

group condition fitness t score  
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.7 -3.1 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.7 compare
carbon source L-Arabinose (C) -0.4 -1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.9 compare
control NoPredeControl -0.4 -1.0 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days -0.4 -2.2 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.4 +2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.4 compare
nitrogen source L-Glutamic (N); low aeration +0.4 +1.8 compare
stress Dimethyl Sulfoxide 5 vol% +0.4 +1.6 compare
r2a control R2A control +0.4 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.2 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.5 +2.1 compare
carbon source Carbon source Deoxyribonucleic from herring sperm 5 mg/mL +0.5 +2.0 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM +0.6 +2.2 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +1.2 compare