Fitness data for HSERO_RS12220 in Herbaspirillum seropedicae SmR1

dehydrogenase
SEED: Short-chain dehydrogenase/reductase SDR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
stress Sisomicin 0.125 mg/ml -4.9 -1.1 compare
stress Cobalt chloride 0.2 mM -4.0 -1.4 compare
stress Lomefloxacin 0.012 mM -1.8 -0.7 compare
carbon source L-Asparagine (C) -1.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.7 -1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.7 -1.2 compare
carbon source D-Mannose (C) -1.5 -1.3 compare
carbon source L-Proline (C) -1.5 -1.3 compare
carbon source Carbon source D-Glucose 20 mM -1.5 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.4 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -1.1 compare
supernatant control Vogels_fungal_media; pH 5.5 -1.4 -0.9 compare
plant Control soil assay; outgrowth in LB -1.3 -1.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.3 -1.2 compare
carbon source D-Galacturonic Acid (C) +1.3 +1.4 compare
carbon source D,L-Lactate (C) +1.4 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.4 +2.3 compare
vitamin No vitamins t1 +1.4 +1.4 compare
agar plate interaction control Taped volatile agar plate with no fungus +1.5 +2.5 compare
carbon source D-Xylose (C) +1.7 +1.5 compare