Fitness data for HSERO_RS12215 in Herbaspirillum seropedicae SmR1

alpha/beta hydrolase superfamily protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
carbon source L-Arabinose (C) -2.9 -3.5 compare
carbon source D-Gluconic Acid (C) -2.0 -2.6 compare
plant Control soil assay; outgrowth in LB -1.6 -1.9 compare
vitamin With vitamins t2 -1.6 -2.1 compare
carbon source L-Lactate (C) -1.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.5 -1.8 compare
vitamin No vitamins t2 -1.5 -2.1 compare
carbon source L-Proline (C) -1.4 -2.9 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.4 -2.6 compare
control NoPredeControl -1.4 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3 -2.2 compare
carbon source L-Arabinose (C) -1.2 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -1.3 compare
carbon source pyruvate (C) -1.2 -2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -1.1 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.1 -1.7 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +1.1 +2.4 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB +1.1 +3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +3.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +1.3 +2.7 compare