Fitness data for HSERO_RS12200 in Herbaspirillum seropedicae SmR1

DNA polymerase II
SEED: DNA polymerase II (EC 2.7.7.7)
KEGG: DNA polymerase II

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Cisplatin 0.003 mg/ml -0.9 -3.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.5 -2.2 compare
plant Control soil assay; outgrowth in LB -0.4 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.3 -1.5 compare
stress Sisomicin 0.125 mg/ml -0.3 -0.9 compare
carbon source D-Galacturonic Acid (C) +0.3 +1.4 compare
carbon source L-Lactate (C) +0.3 +1.3 compare
micoeukaryotes C.elegans, mixed culture-2 +0.3 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.5 compare
carbon source D-Mannose (C) +0.3 +1.8 compare
vitamin No vitamins t2 +0.3 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.3 +1.4 compare
stress nitrate 200 mM +0.3 +1.4 compare
vitamin With vitamins t2 +0.3 +1.8 compare
nitrogen source L-Proline (N) +0.4 +1.9 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.1 compare