Fitness data for HSERO_RS12160 in Herbaspirillum seropedicae SmR1

Fe2+-dicitrate sensor membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.7 -2.9 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days -0.6 -4.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.5 -2.3 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.5 -2.4 compare
carbon source m-Inositol (C) -0.4 -1.8 compare
stress Lomefloxacin 0.012 mM -0.4 -1.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.5 compare
stress sodium fluoride 100 mM +0.4 +1.4 compare
carbon source D-Xylose (C) +0.4 +1.7 compare
carbon source L-Rhamnose (C) +0.4 +1.3 compare
stress Nickel (II) chloride 0.6 mM +0.4 +2.7 compare
carbon source L-Asparagine (C) +0.5 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.1 compare
carbon source Xylitol (C) +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.9 compare
plant Control soil assay; outgrowth in LB +0.5 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.6 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +1.9 compare