Fitness data for HSERO_RS12130 in Herbaspirillum seropedicae SmR1

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data)
Original annotation: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
SEED: Epi-inositol hydrolase (EC 3.7.1.-)
KEGG: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source m-Inositol (C) -4.9 -11.1 compare
carbon source m-Inositol (C) -4.1 -8.0 compare
micoeukaryotes C.elegans, mixed culture-2 -0.5 -2.4 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.4 compare
supernatant control Vogels_fungal_media 0.1X -0.4 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.9 compare
micoeukaryotes C.elegans, mixed culture-1 -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.3 -1.8 compare
nitrogen source nitrate (N); low aeration -0.3 -2.1 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.5 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.7 compare
carbon source D-Lactate (C) +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +0.6 compare
carbon source D-Sorbitol (C) +0.3 +1.6 compare
carbon source D-Gluconic Acid (C) +0.4 +1.7 compare
carbon source pyruvate (C) +0.4 +1.9 compare
carbon source D-Galactose (C) +0.6 +3.3 compare