Fitness data for HSERO_RS12110 in Herbaspirillum seropedicae SmR1

sugar ABC transporter substrate-binding protein
SEED: Inositol transport system sugar-binding protein
KEGG: simple sugar transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source m-Inositol (C) -6.7 -6.2 compare
carbon source m-Inositol (C) -4.5 -7.0 compare
carbon source L-Arabinose (C) -0.8 -2.1 compare
carbon source D-Glucose-6-Phosphate (C) -0.8 -2.2 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.8 -1.5 compare
carbon source L-Arabinose (C) -0.8 -2.5 compare
carbon source pyruvate (C) -0.8 -2.1 compare
carbon source succinate (C) -0.7 -2.2 compare
carbon source L-Proline (C) -0.7 -2.3 compare
carbon source D-Gluconic Acid (C) -0.7 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -3.3 compare
carbon source Glycerol (C) -0.7 -1.9 compare
carbon source L-Rhamnose (C) -0.6 -2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.6 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.8 compare
carbon source D-Glucose (C) -0.6 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.6 -2.4 compare
carbon source D-Lactate (C) -0.6 -2.1 compare
carbon source D,L-Lactate (C) -0.5 -2.2 compare
stress Cisplatin 0.003 mg/ml +0.6 +2.3 compare