Fitness data for HSERO_RS12040 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: LysR family transcriptional regulator YbhD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Arabinose (C) -0.8 -2.0 compare
stress Sisomicin 0.125 mg/ml -0.7 -2.1 compare
carbon source D-Glucose-6-Phosphate (C) -0.7 -3.4 compare
carbon source pyruvate (C) -0.7 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.0 compare
carbon source D-Glucose (C) -0.5 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.6 compare
carbon source m-Inositol (C) -0.5 -1.6 compare
carbon source D,L-Lactate (C) -0.5 -1.9 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.5 -2.2 compare
r2a control R2A control +0.5 +2.3 compare
plant Control soil assay; outgrowth in LB +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.6 +2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +1.2 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +1.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +1.1 compare