Fitness data for HSERO_RS11700 in Herbaspirillum seropedicae SmR1

TonB-dependent receptor
SEED: Ferrichrome-iron receptor
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.4 compare
stress Nickel (II) chloride 0.6 mM -0.4 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.3 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.9 compare
plant Control soil assay; outgrowth in LB -0.3 -1.9 compare
carbon source L-Rhamnose (C) -0.3 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.1 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.3 -1.8 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.3 -1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.2 compare