Fitness data for HSERO_RS11680 in Herbaspirillum seropedicae SmR1

membrane protein
SEED: Major membrane protein I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.3 compare
supernatant control Vogels_fungal_media; pH 5.5 -0.6 -1.3 compare
stress Cobalt chloride 0.2 mM -0.6 -1.1 compare
carbon source D-Lactate (C) -0.5 -1.5 compare
carbon source D-Glucose (C) -0.5 -2.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days -0.5 -1.8 compare
stress nitrite 20 mM -0.5 -0.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.2 compare
carbon source D,L-Lactate (C) +0.5 +1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.4 compare
carbon source succinate (C) +0.5 +1.6 compare
carbon source D-Gluconic Acid (C) +0.5 +1.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.6 +2.1 compare
stress sodium fluoride 100 mM +0.6 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.6 +2.0 compare
carbon source a-Ketoglutaric (C) +0.7 +2.5 compare
carbon source m-Inositol (C) +0.7 +2.5 compare
carbon source D-Galactose (C) +0.8 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4 +1.4 compare