Fitness data for HSERO_RS11625 in Herbaspirillum seropedicae SmR1
dioxygenase
SEED: Methionine ABC transporter substrate-binding protein
KEGG: D-methionine transport system substrate-binding protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)
Or see all 244 experiments or choose conditions
| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | L-Lactate (C) | -1.1 | -3.2 | compare |
| carbon source | L-Rhamnose (C) | -0.9 | -3.3 | compare |
| carbon source | L-Asparagine (C) | -0.9 | -1.7 | compare |
| carbon source | a-Ketoglutaric (C) | -0.8 | -3.6 | compare |
| carbon source | D-Gluconic Acid (C) | -0.8 | -2.7 | compare |
| carbon source | pyruvate (C) | -0.7 | -2.6 | compare |
| carbon source | L-Arabinose (C) | -0.7 | -1.4 | compare |
| carbon source | D-Ribose (C) | -0.7 | -1.5 | compare |
| carbon source | D,L-Lactate (C) | -0.7 | -1.9 | compare |
| carbon source | D-Lactate (C) | -0.7 | -2.5 | compare |
| supernatant control | Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB | -0.6 | -2.0 | compare |
| carbon source | L-Glutamine (C) | -0.6 | -1.6 | compare |
| supernatant control | Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB | -0.6 | -1.1 | compare |
| carbon source | Glycerol (C) | -0.6 | -1.3 | compare |
| carbon source | D-Sorbitol (C) | -0.5 | -1.3 | compare |
| agar plate interaction | Taped volatile agar plate with Trichoderma atroviridae IMI | +0.5 | +2.5 | compare |
| plant | Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB | +0.6 | +1.7 | compare |
| stress | sodium fluoride 100 mM | +0.8 | +2.4 | compare |
| stress | Sisomicin 0.125 mg/ml | +0.9 | +2.4 | compare |
| agar plate interaction control | Parafilmed volatile agar plate with no fungus | +2.0 | +3.4 | compare |