Fitness data for HSERO_RS11495 in Herbaspirillum seropedicae SmR1

LacI family transcription regulator
SEED: Ribose operon repressor
KEGG: LacI family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source L-mannose (C) -3.1 -9.4 compare
carbon source L-mannose (C) -2.8 -5.5 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.7 -3.6 compare
carbon source D-Ribose (C) -1.5 -1.6 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -1.4 -5.1 compare
carbon source D-Mannose (C) -1.2 -2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.2 -2.7 compare
carbon source D-Ribose (C) -1.2 -1.1 compare
carbon source D-Glucose (C) -1.1 -3.4 compare
carbon source D-Xylose (C) -1.1 -1.8 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -3.1 compare
stress Sisomicin 0.125 mg/ml -1.0 -2.9 compare
carbon source D-Mannose (C) -1.0 -3.6 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -1.0 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -2.8 compare
carbon source Xylitol (C) +1.5 +4.6 compare
carbon source Xylitol (C) +1.6 +5.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.9 +1.6 compare