Fitness data for HSERO_RS11490 in Herbaspirillum seropedicae SmR1

D-ribose ABC transporter, permease component RbsC (from data)
Original annotation: ABC transporter permease
SEED: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
KEGG: ribose transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source D-Ribose (C) -5.0 -9.1 compare
carbon source D-Ribose (C) -3.2 -6.5 compare
carbon source L-mannose (C) -0.8 -3.5 compare
carbon source L-mannose (C) -0.7 -2.3 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.7 -1.8 compare
carbon source Glycerol (C) +0.7 +2.8 compare
stress sodium fluoride 100 mM +0.7 +2.3 compare
stress Dimethyl Sulfoxide 5 vol% +0.7 +5.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.0 compare
stress Nickel (II) chloride 0.6 mM +0.8 +3.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.8 +3.9 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.8 +2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 +3.0 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +0.8 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.2 compare
carbon source L-Malic (C) +0.9 +4.6 compare
stress Lomefloxacin 0.012 mM +0.9 +2.4 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.9 +4.1 compare
carbon source m-Inositol (C) +1.0 +3.5 compare
stress Sisomicin 0.125 mg/ml +1.0 +3.1 compare