Fitness data for HSERO_RS11485 in Herbaspirillum seropedicae SmR1

D-ribose ABC transporter, ATPase component RbsA (from data)
Original annotation: ribose ABC transporter ATPase
SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
KEGG: ribose transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Ribose (C) -3.3 -7.7 compare
carbon source D-Ribose (C) -3.1 -7.2 compare
carbon source Xylitol (C) -0.7 -2.6 compare
carbon source Xylitol (C) -0.5 -2.4 compare
carbon source L-Asparagine (C) -0.5 -2.2 compare
stress Lomefloxacin 0.012 mM -0.4 -1.5 compare
carbon source D-Mannose (C) -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.3 compare
carbon source D-Glucose-6-Phosphate (C) -0.3 -1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.3 -2.3 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 3 days +0.3 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.8 compare
nutrient L-Histidine +0.3 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.4 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.0 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +1.3 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.7 +2.6 compare