Fitness data for HSERO_RS11480 in Herbaspirillum seropedicae SmR1

D-ribose ABC transporter, substrate-binding component RbsB (from data)
Original annotation: LacI family transcriptional regulator
SEED: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
KEGG: ribose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source D-Ribose (C) -4.9 -5.3 compare
carbon source D-Ribose (C) -4.2 -4.4 compare
stress Lomefloxacin 0.012 mM -1.7 -1.9 compare
carbon source Xylitol (C) -0.9 -1.8 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.9 -3.0 compare
carbon source L-Rhamnose (C) -0.8 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.9 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM -0.7 -2.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.6 -1.9 compare
carbon source Carbon source D-Glucose 20 mM -0.6 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.0 compare
carbon source m-Inositol (C) +0.6 +1.6 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.6 +2.2 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +0.6 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +1.6 compare
carbon source L-Proline (C) +0.7 +1.8 compare
carbon source Glycerol (C) +0.8 +1.8 compare
carbon source succinate (C) +0.8 +2.3 compare
stress sodium fluoride 100 mM +0.8 +2.0 compare
nitrogen fixation control D-Glucose (C) with ammonium chloride; anaerobic; 8 days +1.0 +4.7 compare