Fitness data for HSERO_RS11430 in Herbaspirillum seropedicae SmR1

GntR family transcriptional regulator
SEED: Propionate catabolism operon transcriptional regulator of GntR family [predicted]

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Xylose (C) -1.4 -3.0 compare
carbon source D-Glucose (C) -0.8 -1.6 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.6 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.7 -2.3 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.7 -2.1 compare
nutrient Min media with glucose -0.6 -2.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.6 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.6 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.8 compare
nutrient casaminos -0.5 -1.5 compare
carbon source D-Xylose (C) -0.5 -1.8 compare
nitrogen source Ammonium chloride (N); high aeration +0.5 +1.6 compare
stress nitrate 200 mM +0.5 +1.3 compare
stress Dimethyl Sulfoxide 5 vol% +0.6 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.4 compare
micoeukaryotes C.elegans, mixed culture-2 +0.8 +2.7 compare
stress Sisomicin 0.125 mg/ml +0.9 +1.9 compare
stress sodium fluoride 100 mM +0.9 +1.4 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM +1.0 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.5 +1.4 compare