Fitness data for HSERO_RS11365 in Herbaspirillum seropedicae SmR1

nuclease
SEED: DNA polymerase III epsilon subunit (EC 2.7.7.7)
KEGG: excinuclease Cho

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Lomefloxacin 0.012 mM -0.5 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.8 compare
carbon source D-Mannitol (C) -0.3 -1.8 compare
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.3 -1.7 compare
carbon source Carbon source Phenylacetic 5 mM -0.3 -1.8 compare
carbon source L-Lactate (C) +0.3 +1.0 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.3 +1.2 compare
stress Cisplatin 0.003 mg/ml +0.3 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.0 compare
carbon source D-Gluconic Acid (C) +0.4 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.8 compare
carbon source D-Ribose (C) +0.4 +1.4 compare
carbon source D-Lactate (C) +0.4 +2.0 compare
carbon source Xylitol (C) +0.4 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.8 compare
carbon source L-Malic (C) +0.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.4 compare