Fitness data for HSERO_RS11335 in Herbaspirillum seropedicae SmR1

permease
SEED: ThiJ/PfpI family protein
KEGG: protease I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -1.4 compare
stress sodium fluoride 100 mM -0.6 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.6 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.4 compare
carbon source Carbon source Phenylacetic 5 mM -0.5 -2.3 compare
stress Lomefloxacin 0.012 mM -0.5 -1.1 compare
carbon source D-Gluconic Acid (C) +0.5 +2.0 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.5 +1.7 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.5 +1.8 compare
carbon source D-Glucose (C) +0.6 +1.6 compare
carbon source pyruvate (C) +0.6 +2.0 compare
carbon source L-Rhamnose (C) +0.7 +2.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.7 +2.0 compare
carbon source D-Sorbitol (C) +0.7 +1.9 compare
carbon source D-Gluconic Acid (C) +0.8 +2.9 compare
micoeukaryotes C.elegans, mixed culture-1 +1.0 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +2.3 +1.6 compare