Fitness data for HSERO_RS11235 in Herbaspirillum seropedicae SmR1

branched-chain amino acid ABC transporter substrate-binding protein
SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
KEGG: branched-chain amino acid transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Glucose (C) -0.7 -2.0 compare
carbon source D-Sorbitol (C) -0.6 -2.9 compare
carbon source D-Glucose-6-Phosphate (C) -0.6 -3.3 compare
carbon source L-Malic (C) -0.6 -2.4 compare
carbon source Xylitol (C) -0.6 -3.3 compare
carbon source D-Glucose (C) -0.5 -1.9 compare
carbon source a-Ketoglutaric (C) -0.5 -2.4 compare
stress Sisomicin 0.125 mg/ml -0.5 -1.6 compare
carbon source D,L-Lactate (C) -0.5 -2.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -0.5 -1.7 compare
carbon source D,L-Lactate (C) -0.5 -2.1 compare
carbon source m-Inositol (C) -0.4 -2.4 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.4 +1.1 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +2.5 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 3 days +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.9 compare
stress Cobalt chloride 0.2 mM +0.6 +3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.8 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +1.1 +5.6 compare
nitrogen fixation control L-Malic (C) with ammonium chloride; anaerobic; 8 days +1.1 +8.2 compare