Fitness data for HSERO_RS11140 in Herbaspirillum seropedicae SmR1

phosphonate ABC transporter permease
SEED: Ferric iron ABC transporter, permease protein
KEGG: iron(III) transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Carbon source 2-Deoxy-D-Ribose 5 mM -0.4 -2.9 compare
stress Fusidic 0.025 mg/ml -0.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.3 -2.1 compare
carbon source Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM -0.3 -2.1 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.3 -1.8 compare
stress Chloride stress -0.3 -1.6 compare
r2a control R2A control -0.3 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.3 -1.9 compare
stress Thallium(I) acetate 0.001 mg/ml -0.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.7 compare
carbon source L-Asparagine (C) -0.3 -1.7 compare
carbon source D-Glucose (C) -0.3 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.3 -1.4 compare
carbon source Carbon source Phenylacetic 5 mM -0.3 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.3 +1.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.4 compare