Fitness data for HSERO_RS11120 in Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.4 -1.8 compare
stress Cisplatin 0.003 mg/ml -0.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.4 compare
carbon source pyruvate (C) +0.3 +1.7 compare
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.3 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +1.9 compare
carbon source L-Lactate (C) +0.4 +1.2 compare
carbon source L-Fucose (C) +0.4 +1.7 compare
carbon source D-Galactose (C) +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +2.1 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB +0.4 +1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +1.3 compare
carbon source L-Arabinose (C) +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +0.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.9 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.6 +3.0 compare