Fitness data for HSERO_RS11010 in Herbaspirillum seropedicae SmR1

RnfH
SEED: UPF0125 protein yfjF
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.5 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.4 -1.6 compare
control NoPredeControl -1.4 -2.5 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI -1.4 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -2.0 compare
control NoPredeControl -1.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.3 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.2 -2.5 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.2 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -1.4 compare
plant Plant assay with Setaria viridis; 10 days of inoculation with plant; outgrowth in LB -1.0 -1.4 compare
carbon source L-Asparagine (C) -1.0 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.9 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +1.0 +2.1 compare